不同番茄材料黄化曲叶病毒病抗性评价及抗性基因检测

以15份自育的无限生长型番茄材料为试材，抗番茄黄化曲叶病毒（Tomato yellow leaf curl virus,TYLCV）品种‘齐达利’和感病品种‘Money Maker’(MM)为对照，采用苗期农杆菌接种法，研究接种黄化曲叶病毒后的病情指数，幼苗叶片防御酶活性的变化，不同基因型番茄材料的抗性水平。结果表明：853、857、867表现为免疫；817、842表现为高抗；805、818、819、820、841表现为中抗；801、802、803、822为感病。853、857、867的防御酶(PAL、PPO、POD)活性在发病初期均达到峰值，且整体高于其他接种材料，其他接种材料酶活性峰值则出现较晚。含抗性基因的接种材料均表现出不同程度的抗性，含有纯合 Ty-1和 Ty-3基因的853、857、867对 TYLCV抗性更高。经综合评价，853、857、867可作为抗番茄黄化曲叶病毒病的优良番茄材料，817、842可作为备选材料。     

Effects of fish meal replacement by low‐gossypol cottonseed meal on growth performance,digestive enzyme activity,intestine histology and inflammatory gene expression of silver sillago (Sillago sihama Forsskál) (1775)

A 56‐day feeding trial was conducted to evaluate the effects on the growth performance, digestive enzyme activity, inflammatory genes expression and intestine histology of silver sillago, Sillago sihama (Forsskål 1775), by replacing fish meal (FM) with low‐gossypol cottonseed meal (LCSM). Five isonitrogenous and isolipidic diets were formulated, including R0 group (control, containing 550.0 g/kg FM), R16 group (88.5 g/kg LCSM and 461.5 g/kg FM), R32 group (177.0 g/kg LCSM and 373.0 g/kg FM), R48 group (265.5 g/kg LCSM and 284.5 g/kg FM) and R64 group (354.0 g/kg LCSM and 196.0 g/kg FM). Fish fed R0 and R16 groups had a significantly higher weight gain rate (WGR) and specific growth rate (SGR) than R48 and R64 groups (p < .05). In contrast to whole‐body crude protein, whole‐body moisture increased with the FM level of substitution (p < .05). With the increased amount of LCSM in the diet, the activity of intestinal amylase (AMS) increased significantly (p < .05), and intestinal trypsin (TRP) decreased (p < .05). Dietary LCSM substitution upregulated the expression of intestinal tumour necrosis factor‐α (TNF‐α), the nuclear factor kappa‐light‐chain‐enhancer of activated B cells (NF‐κB), and interleukin one beta (IL‐1β), but downregulated tight junction proteins ZO‐1(ZO‐1), transforming growth factor beta‐3 (TGF‐β3) and interleukin 10 (IL‐10) expression. Histological analysis revealed progressive morphological damage to the mid‐intestine with higher levels of FM replacement. These results showed that 88.5 g/kg (16%) of FM replaced by LCSM with amino acids (methionine and lysine) supplementation did not significantly reduce growth compared with FM‐based control.     

一株大黄鱼致病性溶藻弧菌的耐药性及耐药基因分析

对一株分离自大黄鱼的致病性溶藻弧菌进行耐药性分析,分别用纸片扩散法、倍比稀释法检测了该菌对磺胺甲噁唑、氟苯尼考、盐酸多西环素、红霉素、盐酸环丙沙星、土霉素、恩诺沙星、硫酸新霉素、氨苄西林钠共9种药物的耐药性,同时用PCR法检测了该菌β-内酰胺酶基因bla CTX-M,喹诺酮类耐药基因(qnrVC,qnrVC5),四环素耐药基因(tetS、tetM)等耐药基因的携带情况。结果表明该菌对氨苄西林钠等药物耐药。对氟苯尼考、磺胺甲噁唑高度敏感。同时该菌携带bla CTX-M,qnrVC 2种耐药基因。本研究的结果为溶藻弧菌病的精准用药提供了数据支持。     

人溶菌酶密码子优化及其在牛乳腺细胞中高效表达

【目的】分析牛乳腺中7种主要乳蛋白基因密码子使用偏好性,筛选高频密码子和低频密码子,依据其对人溶菌酶基因进行密码子局部优化和全局优化,通过牛乳腺上皮细胞等多种细胞对优化效果进行分析评价,为提高重组人溶菌酶表达量,开发新型、高效、安全的重组人溶菌酶提供理论依据。【方法】利用CodonW和EMBOSS等软件对7种主要牛乳蛋白和人溶菌酶基因密码子偏好进行生物信息学分析,筛选牛乳蛋白基因高频、低频密码子并根据牛乳蛋白基因密码子使用偏好对人溶菌酶基因翻译起始区前22位密码子（LYZop22）和全局密码子(LYZop)分别进行优化。构建人溶菌酶-荧光素酶融合表达载体（pGL3-LYZcw/op22/op）和人溶菌酶过表达载体（pcDNA-LYZcw/op22/op）,将上述载体分别转染牛乳腺上皮细胞(BMEC)、牛成纤维细胞（BFFC）和C127小鼠乳腺上皮细胞等3种细胞,通过荧光素酶、实时荧光定量PCR及Western-blot等方法检测密码子优化对溶菌酶表达的影响。【结果】牛乳蛋白基因密码子偏好以GC结尾,GC3s平均含量为0.537±0.062,而人溶菌酶GC3s含量为0.407,偏好以AT结尾;聚类结果表明,牛乳中酪蛋白与乳清蛋白类基因在密码子使用偏好性上也存在一定差异。依据筛选获得的牛主要乳蛋白基因5个高频密码子（RSCU>1.5）和7个低频密码子（RSCU<0.5）对人溶菌酶基因密码子进行优化并转染多种细胞进行表达效果分析。荧光素酶分析发现,相比野生型溶菌酶密码子（LYZcw）,翻译起始区密码子优化类型LYZop22分别在BMEC、BFFC细胞中提高1.48倍（P<0.01）和1.30倍（P>0.05）;而全局密码子优化类型LYZop分别在BMEC、BFFC中提高2.2倍（P<0.01）和2.44倍（P<0.01）,说明密码子优化能明显提高人溶菌酶在多种细胞中表达量。实时荧光定量PCR结果表明,LYZop22相比LYZcw在BMEC和BFFC细胞中分别提高了2.08倍（P<0.05）和1.5倍（P>0.05）,而LYZop则分别提高了22倍（P<0.01）和17.8倍（P<0.01）,mRNA表达水平与密码子优化后的mRNA二级结构稳定性呈正相关。Western-blot结果也进一步表明,密码子优化后的LYZop22和LYZop能明显提高重组人溶菌酶在牛乳腺上皮细胞中的表达量。上述结果表明,根据牛乳腺中主要乳蛋白基因密码子使用偏好进行密码子优化,能显著提高人溶菌酶在牛乳腺上皮细胞及成纤维细胞中的表达量,且溶菌酶基因全局密码子优化效果优于翻译起始区密码子优化效果。【结论】通过生物信息学分析获得了牛乳蛋白基因使密码子使用偏好及高低频密码子;依据牛乳蛋白密码子使用偏好性对人溶菌酶密码子优化能显著提高重组人溶菌酶mRNA水平和蛋白水平的表达量,为今后利用生物反应器高效生产重组人溶菌酶奠定基础。     

生物炭连续施用对农田土壤氮转化微生物及N2O排放的影响

【目的】研究连续添加生物炭6年后对农田土壤氮转化相关微生物功能基因的影响,揭示生物炭影响作物产量和N₂O排放的微生物学机制,并为生物炭的推广使用提供理论依据。【方法】通过在潮土农田设置0（BC0,对照)、2.25（BCL,低量）、6.75（BCM,中量）和11.25 t·hm^-2（BCH,高量）4个秸秆生物炭量处理的田间定位试验,采用田间观测、化学分析、荧光定量PCR（qPCR）技术,系统研究施用生物炭对氧化亚氮（N₂O）排放、氨单加氧酶（amoA）、亚硝酸还原酶（nirK、nirS）、氧化亚氮还原酶（nosZ）基因丰度及夏玉米产量的影响。【结果】与对照BC0处理相比,施用生物炭可显著提高夏玉米籽粒产量,且BCM处理籽粒产量达到最大值10 811 kg·hm^-2,显著降低夏玉米生育期N₂O累积排放量,并以BCM处理减少N₂O排放效果最优。研究还发现,在夏玉米多个生育时期,与对照比较,生物炭施用可以显著提高耕层土壤无机氮储量和土壤含水量。此外,随着生物炭施用量增加,土壤氨氧化古菌（AOA）基因拷贝数在夏玉米大喇叭口期和成熟期均表现为先上升后下降趋势,且两个时期均以BCM处理最高,而氨氧化细菌（AOB）基因拷贝数在夏玉米大喇叭口期和成熟期分别为BCH处理和BCM处理最高。与对照相比,中、高量生物炭施用（BCM、BCH处理）可显著提高夏玉米大喇叭口期和成熟期土壤反硝化作用功能相关基因（nirK、nirS、nosZ）拷贝数。相关性分析表明,夏玉米成熟期土壤N₂O排放通量与土壤硝态氮、土壤含水量、AOA、AOB、nirK、nirS、nosZ呈显著负相关关系。【结论】施用生物炭通过增加土壤微生物氮转化功能基因丰度进而降低土壤N₂O排放,通过增加土壤耕层无机氮储量和土壤水分含量进而提高作物产量,并以中等用量（6.75 t·hm^-2）施用效果最优。     

Turnip crinkle virus with nonviral gene cancels the effect of silencing suppressors of P19 and 2b in Arabidopsis thaliana

In plants, green fluorescent protein (GFP) has become a preferred molecular marker for gene expression and cellular localization, and plant viral vectors are valuable tools for heterologous gene expression. Some plant viruses have been used for expression of GFP, and the activities of these viruses are barely affected by the extra GFP gene. In contrast, the packaging and the length of Turnip crinkle virus (TCV) genome is strictly limited when foreign genes are inserted into the coding sequences of TCV genome. In this report, we removed the silencing suppressor p38 from TCV, and constructed GFP derivatives of TCV. Then the resulting TCV mutants were used to infect Arabidopsis plants containing mutations in key silencing pathway genes, including triple dcl2/dcl3/dcl4, dcl2, dcl4 and ago mutant plants. Our results demonstrate that the activity of TCV is affected by nonviral GFP insert in Arabidopsis plants, and RNA silencing appears not play an important role. AGOs appear to be more efficient at slicing RNAs of viral origin, especially AGO2 and AGO7. Although the viral suppressors of RNA silencing (VSRs) P19 and 2b can enhance the accumulation of viral RNAs, neither P19 nor 2b can significantly increase the expression of TCV mutants with nonviral genes. TCV is an example of an RNA virus that is recalcitrant to add nonviral gene sequences.     

棉铃虫 JNKs 基因的克隆及表达分析

c-Jun氨基末端激酶(c-Jun N-terminal kinase, JNK)是MAPK家族(mitogen-activated protein kinases, 丝裂原活化蛋白激酶)的重要成员, 具有参与昆虫抗逆反应等多种功能。为明确JNK在棉铃虫 Helicoverpa armigera 中的表达特性及其对Bt杀虫蛋白的应激与免疫反应, 本研究通过PCR克隆得到2个棉铃虫 JNK 基因 HaJNK1 和 HaJNK2; 生物信息学分析结果显示: HaJNK1和 HaJNK2基因开放阅读框分别为1 191、1 143 bp, 分别编码397、381个氨基酸。系统进化树分析结果表明棉铃虫 HaJNK1 与黏虫 Mythimna separata 聚为一支, 亲缘关系较近, HaJNK2与 家蚕 Bombyx mori 聚为一支, 同源性较高。利用实时荧光定量PCR技术分析 HaJNK1 与 HaJNK2 在棉铃虫不同发育时期、不同组织中的表达量, 发现 HaJNK1 与 HaJNK2 在卵中表达量最高, 其次是雌成虫; HaJNK1 在性腺中表达量最高, 其次是唾液腺; HaJNK2 在头部表达量最高, 其次是性腺。取食Cry1Ac的4龄棉铃虫幼虫的中肠组织中, HaJNK1 与 HaJNK2 的表达量均显著升高。推测 HaJNKs 基因可能参与棉铃虫抵御Bt杀虫蛋白伤害的应激和抗逆反应。     

农杆菌介导含硫氨基酸γ-zein转化菊苣的初步研究

含硫氨基酸具有动物营养与免疫相关的重要生理功能,为提高菊苣中含硫氨基酸含量,采用根癌农杆菌介导法将玉米种子贮藏蛋白含硫氨基酸基因γ-zein和绿色荧光蛋白GFP融合基因转入到菊苣无菌苗叶片中,经过共培养、潮霉素抗性筛选、分化、再生和炼苗,得到抗性植株。对抗性植株进行PCR、PCR-Southern、斑点杂交和RTPCR分析,结果表明,外源目的基因已经整合到菊苣基因组中并且得到了表达,为提高菊苣含硫氨基酸含量,改善其品质奠定了基础。     

Phenotypic and genotypic characterization of canine pyoderma isolates of Staphylococcus pseudintermedius for biofilm formation

Biofilm-forming ability is increasingly being recognized as an important virulence factor in several Staphylococcus species. This study evaluated the biofilm-forming ability of sixty canine derived clinical isolates of S. pseudintermedius, using three phenotypic methods, microtiter plate test (MtP), Congo red agar method (CRA) and tube adherence test, and the presence and impact of biofilm-associated genes (icaA and icaD). The results showed that icaA and icaD genes were detected concomitantly in 55 (91.7%) of 60 isolates. A majority (88.3%) of the strains screened had matching results by the tube adherence test, MtP and PCR analysis. Better agreement (95%) was found between the PCR-based analysis and the CRA. Results of the icaA and icaD gene PCRs showed good agreement with CRA results, with a kappa of 0.7. Comparing the phenotypic methods, the statistical analysis showed that the agreement among the phenotypical tests using categorical data was generally good. Considering two classes (biofilm producer and biofilm non-producer), the percentage of matching results between the CRA method and the tube adherence test and between the CRA method and the MtP was 93.3%. A concordance of 100% was revealed between the MtP and the tube adherence test. The results indicate a high prevalence of the ica genes within S. pseudintermedius isolates, and their presence is associated with in vitro formation of a biofilm. A combination of phenotypic and genotypic tests is recommended for investigating biofilm formation in S. pseudintermedius.